Rascaf: improving genome assembly with RNA sequencing data

L Song, DS Shankar, L Florea - The plant genome, 2016 - Wiley Online Library
Abundant but short second‐generation sequencing reads make assembly difficult, leading
to fragmented genomes and gene annotations. Gene structure information from RNA …

Current controversies in arthroscopic partial meniscectomy

A Avila, K Vasavada, DS Shankar, M Petrera… - Current Reviews in …, 2022 - Springer
Purpose of Review Given the continued controversy among orthopedic surgeons regarding
the indications and benefits of arthroscopic partial meniscectomy (APM), this review …

Assessing the predictive value of primary evaluation with the Immediate Post-Concussion Assessment and Cognitive Test following head injury

T Hannah, N Dreher, AY Li, DS Shankar… - Journal of …, 2020 - thejns.org
OBJECTIVE Concussions are a major public health concern, especially for high school and
college student athletes. However, there are few prognostic metrics that can accurately …

[HTML][HTML] Increasing patient-reported allergies are not associated with pain, functional outcomes, or satisfaction following medial patellofemoral ligament reconstruction …

AS Bi, DS Shankar, KD Vasavada, ND Fisher… - Knee Surgery & Related …, 2022 - Springer
Background Patient-reported allergies (PRAs) are often stigmatized as a potential
nonmodifiable risk factor for increased pain and worse functional outcomes following surgery. …

[HTML][HTML] Acceptable clinical outcomes despite high reoperation rate at minimum 12-month follow-up after concomitant arthroscopically assisted anterior cruciate …

DS Shankar, KD Vasavada, A Avila… - Knee Surgery & Related …, 2023 - Springer
Background Single-stage medial meniscus allograft transplantation (MAT) with concomitant
anterior cruciate ligament reconstruction (ACLR) is a technically challenging procedure for …

Hip arthroscopy for femoroacetabular impingement-associated labral tears: Current status and future prospects

S Buzin, D Shankar, K Vasavada… - Orthopedic Research and …, 2022 - Taylor & Francis
Femoroacetabular impingement (FAI) has emerged as a common cause of hip pain, especially
in young patients. While the exact cause of FAI is unknown, it is thought to result from …

Minimal clinically important difference (MCID), substantial clinical benefit (SCB), and patient acceptable symptomatic state (PASS) of upper extremity PROMIS scores …

MG Alben, N Gambhir, D Shankar, D Gordon… - Clinical …, 2023 - Springer
Introduction The purpose of this study is to calculate the minimal clinically important
difference (MCID), substantial clinical benefit (SCB), and patient acceptable symptom state (PASS) …

Class I obesity delays achievement of patient-acceptable symptom state but not minimum clinically important difference or substantial clinical benefit after primary hip …

DS Shankar, AS Bi, R Lan, S Buzin, T Youm - Arthroscopy: The Journal of …, 2023 - Elsevier
Purpose To identify differences in the time taken to achieve the minimum clinically important
difference (MCID), substantial clinical benefit (SCB), and patient-acceptable symptom state (…

Borderline hip dysplasia is not associated with significant differences in hip survivorship or patient-reported outcomes following primary hip arthroscopy for …

ZI Li, DS Shankar, B Akpinar, ND Rynecki… - … : The Journal of …, 2024 - Elsevier
Purpose To compare hip survivorship and patient-reported outcomes after primary hip
arthroscopy for femoroacetabular impingement syndrome (FAIS) in patients with versus without …

Global Acetabular Retroversion Is Not Associated With Differences in Outcomes After Primary Hip Arthroscopy Among Patients With Femoroacetabular Impingement …

I Savage-Elliott, DS Shankar, ZI Li, M Moore… - … : The Journal of …, 2024 - Elsevier
Purpose To compare hip survivorship and patient-reported outcome measures (PROMs)
after primary hip arthroscopy at 5-year follow-up between patients with femoroacetabular …